siibra.volumes.providers.freesurfer

Handles reading and preparing gii files.

Module Contents

Classes

FreesurferAnnot

Helper class that provides a standard way to create an ABC using

ZippedFreesurferAnnot

Helper class that provides a standard way to create an ABC using

class siibra.volumes.providers.freesurfer.FreesurferAnnot(url: str | dict)
Inheritance diagram of siibra.volumes.providers.freesurfer.FreesurferAnnot

Helper class that provides a standard way to create an ABC using inheritance.

fetch(fragment: str = None, label: int = None, **kwargs)

Returns a 1D numpy array of label indices.

abstract get_boundingbox(clip=False, background=0.0) siibra.locations.boundingbox.BoundingBox
class siibra.volumes.providers.freesurfer.ZippedFreesurferAnnot(url: str | dict)
Inheritance diagram of siibra.volumes.providers.freesurfer.ZippedFreesurferAnnot

Helper class that provides a standard way to create an ABC using inheritance.

fetch(fragment: str = None, label: int = None, **kwargs)

Returns a 1D numpy array of label indices.

abstract get_boundingbox(clip=False, background=0.0) siibra.locations.boundingbox.BoundingBox