siibra.locations.location

Concepts that have primarily spatial meaning.

Module Contents

Classes

Location

Abstract base class for locations in a given reference space.
class siibra.locations.location.Location(space)
Inheritance diagram of siibra.locations.location.Location

Abstract base class for locations in a given reference space.

property space
property species
BIGBRAIN_ID = 'minds/core/referencespace/v1.0.0/a1655b99-82f1-420f-a3c2-fe80fd4c8588'
SPACEWARP_IDS
SPACEWARP_SERVER = 'https://hbp-spatial-backend.apps.hbp.eu/v1'
abstract __eq__()

Required to provide comparison and making the object hashable

__hash__() → int

Return hash(self).

__repr__()

Return repr(self).

__str__()

Return str(self).

abstract transform(affine: numpy.ndarray, space=None)

Returns a new location obtained by transforming the reference coordinates of this one with the given affine matrix.

Parameters:

  • affine (numpy 4x4 ndarray) – affine matrix

  • space (reference space (id, name, or Space)) – Target reference space which is reached after applying the transform. Note that the consistency of this cannot be checked and is up to the user.

abstract static union(loc0: Location, loc1: Location) → Location

Reassigned at the locations module level for static typing and to avoid circular imports. See siibra.locations.__init__.reassign_union()

abstract warp(space)

Generates a new location by warping the current one into another reference space.